BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008A03LP1|AL425787
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1672 1565 0.0
3x_Contig35 348 1e-95
>3x_Contig1672
Length = 13609
Score = 1565 bits (787), Expect = 0.0
Identities = 791/795 (99%)
Strand = Plus / Plus
Query: 1 aaacaatacatccaatggtttggcgaccattcatacccgaaagcgtcaattcaccatcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1662 aaacaatacatccaatggtttggcgaccattcatacccgaaagcgtcaattcaccatcag 1721
Query: 61 tgcccacatcgtacaacaacaacgctgacccaccagaccacgtactaatacacaaacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1722 tgcccacatcgtacaacaacaacgctgacccaccagaccacgtactaatacacaaacaaa 1781
Query: 121 gcaatgtccagtatgatgtaaaaccatatataccccawtttcytcttgaaacaggcatag 180
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 1782 gcaatgtccagtatgatgtaaaaccatatataccccattttcttcttgaaacaggcatag 1841
Query: 181 gaacwaaatccttattactagttctgtcggattcatccaacaccaaaaggttgtgcaact 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1842 gaactaaatccttattactagttctgtcggattcatccaacaccaaaaggttgtgcaact 1901
Query: 241 tcccaagaaccccagccattacaaactttcaacaatctttaaatcctggtgtttattgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1902 tcccaagaaccccagccattacaaactttcaacaatctttaaatcctggtgtttattgca 1961
Query: 301 ctagttaaaacaatgcctatggagcagccaagttaagtacgaacgaatacgatgcgaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1962 ctagttaaaacaatgcctatggagcagccaagttaagtacgaacgaatacgatgcgaaaa 2021
Query: 361 acgcacaaaccttagtttatgtatcgtctagtatttatgaaaaagaacagtctattactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2022 acgcacaaaccttagtttatgtatcgtctagtatttatgaaaaagaacagtctattactg 2081
Query: 421 agatgagatgaaccgaattgaaaaagatatactaagatttgatacaaagattaggcaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2082 agatgagatgaaccgaattgaaaaagatatactaagatttgatacaaagattaggcaaaa 2141
Query: 481 acaaacatagaaatatattgtccaccaaaacaacaaacaaatgactacttttagtctgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2142 acaaacatagaaatatattgtccaccaaaacaacaaacaaatgactacttttagtctgtg 2201
Query: 541 cccccgttcaatttcagaagtattaacggctgcatggtacaaaactcgagacatatacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2202 cccccgttcaatttcagaagtattaacggctgcatggtacaaaactcgagacatatacag 2261
Query: 601 aaccactaggagacccacagtttgtaggcaaggctgcctttattcaaaggtaaacatttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2262 aaccactaggagacccacagtttgtaggcaaggctgcctttattcaaaggtaaacatttt 2321
Query: 661 tcgaaggaataaagaaaaaaaattttcacccaaaagaaacggaccctctacggccgttaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2322 tcgaaggaataaagaaaaaaaattttcacccaaaagaaacggaccctctacggccgttaa 2381
Query: 721 cagaaacaagcacccgtctctgtaggttctttaaagttctgagtaaatcgtgccawgctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2382 cagaaacaagcacccgtctctgtaggttctttaaagttctgagtaaatcgtgccatgctt 2441
Query: 781 gccgtgttagctgga 795
|||||||||||||||
Sbjct: 2442 gccgtgttagctgga 2456
>3x_Contig35
Length = 604
Score = 348 bits (175), Expect = 1e-95
Identities = 284/321 (88%), Gaps = 1/321 (0%)
Strand = Plus / Plus
Query: 1 aaacaatacatccaatggtttggcgaccattcatacccgaaagcgtcaattcaccatcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aaacaatacatccaatggtttggcgaccattcatacccgaaagcgtcaattcaccatcag 125
Query: 61 tgcccacatcgtacaacaacaacgctgacccaccagaccacgtactaatacacaaacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tgcccacatcgtacaacaacaacgctgacccaccagaccacgtactaatacacaaacaaa 185
Query: 121 gcaatgtccagtatgatgtaaaaccatatataccccawtttcytcttgaaacaggcatag 180
|||| |||| ||| || ||||||||||||||||||| |||| |||| | ||| |||
Sbjct: 186 tcaatttccattattatttaaaaccatatataccccattttcttctttatacatttatat 245
Query: 181 gaacwaaatccttattactagttc-tgtcggattcatccaacaccaaaaggttgtgcaac 239
||| ||||||||||||||| ||| | || ||||| |||||||||||| || | ||||
Sbjct: 246 taactaaatccttattactatttcttttcttattcaaccaacaccaaaatttttttcaac 305
Query: 240 ttcccaagaaccccagccattacaaactttcaacaatctttaaatcctggtgtttattgc 299
||||||| ||||||| |||||||||||||||||||| || |||||||| | || ||| |
Sbjct: 306 ttcccaataaccccatccattacaaactttcaacaaactataaatcctttttttaatttc 365
Query: 300 actagttaaaacaatgcctat 320
|||| |||| ||||| |||||
Sbjct: 366 actatttaatacaattcctat 386
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7106
Number of Sequences: 1807
Number of extensions: 7106
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 2
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)